Protein ZmS1Fa2
ZmS1Fa2 is a protein in the S1Fa-like family.
Information
TF Name: ZmS1Fa2
Species: Maize
TF Family: S1Fa-like
Gene Name(Synonym): SFB1
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmS1Fa2

ZmS1Fa2 is a protein in the S1Fa-like family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d025339DAPseq no logo sequence fimo position
Zm00001d025339DAPseq no logo sequence fimo position
Zm00001d025339ChIPseq no logo sequence fimo position
Zm00001d025339PChIPseq no logo sequence fimo position

Interactions where ZmS1Fa2 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmS1Fa2 is the target  
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There are 128 protein-dna interactions that fit this criteria. download excel sheet

GRMZM2G147424_T01 from maize genome v3


Related TFome: pUT6291

Amino Acid Sequence
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MADQFADSANNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

MADQFADSANNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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CACAACCCGGAAACGCGCAAAGCGA...

GRMZM2G147424_T02 from maize genome v3

Amino Acid Sequence
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MADQFADSANNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

Nucleotide Sequence
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CACAACCCGGAAACGCGCAAAGCGA...

GRMZM2G147424_T03 from maize genome v3

Amino Acid Sequence
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MFQNNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

Nucleotide Sequence
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GATAGATTCAAATTAGGCTTCATCT...

GRMZM2G147424_T04 from maize genome v3

Amino Acid Sequence
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MYRVRSGTAASSLWATPPPPPPKTTNCPLSRPSPVGTTFSPSSITLFLHLAIEPLAASAPSGRRLCGSGAPRCGSARTFP
GSGVLSPGCAPMLCPALWCRARAGSTYSRARHLGLSSLCGRVYS

Nucleotide Sequence
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ACAACCCGGAAACGCGCAAAGCGAA...

Zm00001d025339_T001 from maize genome v4

Amino Acid Sequence
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MADQFADSANNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

Nucleotide Sequence
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CACCGTACCAGCAGCGCAAAGGTGA...

Zm00001d025339_T002 from maize genome v4

Amino Acid Sequence
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KREGGISGKKTQGTTVPAAQRAGCWHRSGGRHGGSVRGFGEQRDHRGGEQGTEPRNGGSARGCQLPAALLCRELRAVCVR
AEDAPAEEEEAGLQEEAEEGKAEAGCLRARGVNRQGCRRSARPEPAPYLHDCRRKKIHLLEPRCS

Nucleotide Sequence
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GAAGAGGGAAGGGGGGATATCGGGG...

Zm00001d025339_T003 from maize genome v4

Amino Acid Sequence
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MADQFADSANNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

Nucleotide Sequence
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CACAACCCGGAAACGCGCAAAGCGA...

Zm00001d025339_T004 from maize genome v4

Amino Acid Sequence
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MADQFADSANNVIIEEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE

Nucleotide Sequence
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GTGCTAAAACCAGAACTAAGAATAT...

Zm00001d025339_T005 from maize genome v4

Amino Acid Sequence
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MLCPALWCRARAGSTYSRARHLGLSSLCGRVYS

Nucleotide Sequence
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GAGGGAAGGGGGGATATCGGGGAAA...

Zm00001d025339_T006 from maize genome v4

Amino Acid Sequence
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MYRVRSGTAASSLWATPPPPPPKTTNCPLSRPSPVGTTFSPSSITLFLHLAIEPLAASAPSGRRLCGSGAPRCGSARTFP
GSGVLSPGCAPMLCPALWCRARAGSTYSRARHLGLSSLCGRVYS

Nucleotide Sequence
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GAAGAGGGAAGGGGGGATATCGGGG...

Zm00001d025339_T007 from maize genome v4

Amino Acid Sequence
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GKKTQGTTVPAAGCWHRSGGRHGGSVRGFGEQRDHRGGEQGTEPRNGGSARGCQLPAALLCRELRAVCVRAEDAPAEEEE
AGLQEEAEEGKAEAGCLRARGVNRQGCRRSARPEPAPYLHDCRRKKIHLLEPRCS

Nucleotide Sequence
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GGGAAAAAAACGCAAGGTACCACCG...

Zm00001d025339_T008 from maize genome v4

Amino Acid Sequence
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MYRVRSGTAASSLWATPPPPPPKTTNCPLSRPSPVGTTFSPSSITLFLHLAIEPLAASAPSGRRLCGSGAPRCGSARTFP
GSGVLSPGCAPMLCPALWCRARAGSTYSRARHLGLSSLCGRVYS

Nucleotide Sequence
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GAAGAGGGAAGGGGGGATATCGGGG...

Zm00001d025339_T009 from maize genome v4

Amino Acid Sequence
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MLCPALWCRARAGSTYSRARHLGLSSLCGRVYS

Nucleotide Sequence
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GAAGAGGGAAGGGGGGATATCGGGG...


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